Prof. Leo Eberl Department of Plant and Microbial Biology University of Zürich Zollikerstrasse 107 CH-8008 Zürich leberl@botinst.uzh.ch phone: +41 (0)44 63 48220 fax: +41 (0)44 63 48204 List of Publications
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List of Publications

L. Eberl. 2023. Rehabilitation of the 'bad guys' for biocontrol applications. Environmental microbiology. 2 (1):97-101.
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Straub, H., Zuber, F., Eberl, L., Maniura-Weber, K., and Q. Ren. 2023. In Situ Investigation of Pseudomonas aeruginosa Biofilm Development: Interplay between Flow, Growth Medium, and Mechanical Properties of Substrate. ACS Appl Mater Interfaces. 1 (2):2781-91.
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Belles-Sancho, P., Liu, Y., Heiniger, B., von Salis, E., Eberl, L., Ahrens, C. H., Zamboni, N., Bailly, A., and G. Pessi. 2022. A novel function of the key nitrogen-fixation activator NifA in beta-rhizobia: Repression of bacterial auxin synthesis during symbiosis. Front Plant Sci. 13:991548
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Paszti, S., Vitale, A., Liu, Y., Braunwalder, R., Kalawong, R., Biner, O., Pessi, G., and L. Eberl. 2022. Identification of Key Factors for Anoxic Survival of B. cenocepacia H111. Int J Mol Sci. 2 (9).
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Purtschert-Montenegro, G., Carcamo-Oyarce, G., Pinto-Carbo, M., Agnoli, K., Bailly, A., and L. Eberl. 2022. Pseudomonas putida mediates bacterial killing, biofilm invasion and biocontrol with a type IVB secretion system. Nat Microbiol.1547-57
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Schnyder, A., Eberl, L., and K. Agnoli. 2022. Investigating the Biocontrol Potential of the Natural Microbiota of the Apple Blossom. Microorganisms. 1 (12).
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Secchi, E., Savorana, G., Vitale, A., Eberl, L., Stocker, R., and R. Rusconi. 2022. The structural role of bacterial eDNA in the formation of biofilm streamers. Proc Natl Acad Sci U S A. 11 (12):e2113723119.
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Steiner, E., Shilling, R. E., Richter, A. M., Schmid, N., Fazli, M., Kaever, V., Jenal, U., Tolker-Nielsen, T., and L. Eberl. 2022. The BDSF quorum sensing receptor RpfR regulates Bep exopolysaccharide synthesis in Burkholderia cenocepacia via interaction with the transcriptional regulator BerB. NPJ Biofilms Microbiomes. (1):93.
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Belles-Sancho, P., Lardi, M., Liu, Y., Eberl, L., Zamboni, N., Bailly, A., and G. Pessi. 2021. Metabolomics and Dual RNA-Sequencing on Root Nodules Revealed New Cellular Functions Controlled by Paraburkholderia phymatum NifA. Metabolites. 1 (7).
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Bernal, P., Eberl, L., de Jonge, R., Lepek, V. C., and J.G. Malone. 2021. Understanding plant-microorganism interactions to envision a future of sustainable agriculture. Environmental microbiology. 2 (4):1809-11.
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Fenn, S., Dubern, J. F., Cigana, C., De Simone, M., Lazenby, J., Juhas, M., Schwager, S., Bianconi, I., Doring, G., Elmsley, J., Eberl, L., Williams, P., Bragonzi, A., and M. Camara. 2021. NirA Is an Alternative Nitrite Reductase from Pseudomonas aeruginosa with Potential as an Antivirulence Target. mBio. 1 (2).
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Georgieva, M., Heinonen, T., Vitale, A., Hargraves, S., Causevic, S., Pillonel, T., Eberl, L., Widmann, C., and N. Jacquier. 2021. Bacterial surface properties influence the activity of the TAT-RasGA (317-326) antimicrobial peptide. iScience. 24(8):102923.
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Georgiou, A., Sieber, S., Hsiao, C. C., Grayfer, T., Gorenflos Lopez, J. L., Gademann, K., Eberl, L.,and A. Bailly. 2021. Leaf nodule endosymbiotic Burkholderia confer targeted allelopathy to their Psychotria hosts. Scientific reports. 1 (1):22465.
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Gualdi S, Agnoli K, Vitale A, Higgins S, and L. Eberl. Identification of genes required for gold and silver tolerance in Burkholderia cenocepacia H111 by transposon sequencing (2021) Environ Microbiol. Mar 18.
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Heredia-Ponce, Z., Gutierrez-Barranquero, J. A., Purtschert-Montenegro, G., Eberl, L., de Vicente, A., and F. M. Cazorla. 2021. Role of extracellular matrix components in the formation of biofilms and their contribution to the biocontrol activity of Pseudomonas chlororaphis PCL1606. Environmental microbiology. 2 (4):2086-101.
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Hug, S., Liu, Y., Heiniger, B., Bailly, A., Ahrens, C. H., Eberl, L., and G. Pessi. 2021. Differential Expression of Paraburkholderia phymatum Type VI Secretion Systems (T6SS) Suggests a Role of T6SS-b in Early Symbiotic Interaction. Front Plant Sci. 12:699590.
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Mannweiler, O., Pinto-Carbo, M., Lardi, M., Agnoli, K., and L. Eberl. 2021. Investigation of Burkholderia cepacia Complex Methylomes via Single-Molecule, Real-Time Sequencing and Mutant Analysis. J Bacteriol. 20 (12):e0068320.
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Sieber, S., Mathew, A., Jenul, C., Kohler, T., Bar, M., Carrion, V. J., Cazorla, F. M., Stalder, U., Hsieh, Y. C., Bigler, L., Eberl, L., and K. Gademann. 2021. Mitigation of Pseudomonas syringae virulence by signal inactivation. Sci Adv. (37):eabg2293.
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Vandenbussche, I., Sass, A., Van Nieuwerburgh, F., Pinto-Carbo, M., Mannweiler, O., Eberl, L., and T. Coenye. 2021. Detection of cytosine methylation in Burkholderia cenocepacia by single-molecule real-time sequencing and whole-genome bisulfite sequencing. Microbiology (Read). 167(3).
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Wong, G. C. L., Antani, J. D., Lele, P. P., Chen, J., Nan, B., Kuhn, M. J., Persat, A., Bru, J. L., Hoyland-Kroghsbo, N. M., Siryaporn, A., Conrad, J. C., Carrara, F., Yawata, Y., Stocker, R., Y, V. B., Whitfield, G. B., Lee, C. K., de Anda, J., Schmidt, W. C., Golestanian, R., O'Toole, G. A., Floyd, K. A., Yildiz, F. H., Yang, S., Jin, F., Toyofuku, M., Eberl, L., Nomura, N., Zacharoff, L. A., El-Naggar, M. Y., Yalcin, S. E., Malvankar, N. S., Rojas-Andrade, M. D., Hochbaum, A. I., Yan, J., Stone, H. A., Wingreen, N. S., Bassler, B. L., Wu, Y., Xu, H., Drescher, K., and J. Dunkel. 2021. Roadmap on emerging concepts in the physical biology of bacterial biofilms: from surface sensing to community formation. Phys Biol. 1 (5).
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Habjanic, J., Mathew, A., Eberl, L., and E. Freisinger. 2020. Deciphering the Enigmatic Function of Pseudomonas Metallothioneins. Front Microbiol. 11:1709
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Heredia-Ponce, Z., Gutierrez-Barranquero, J. A., Purtschert-Montenegro, G., Eberl, L., Cazorla, F. M., and A. de Vicente. 2020. Biological role of EPS from Pseudomonas syringae pv. syringae UMAF0158 extracellular matrix, focusing on a Psl-like polysaccharide. NPJ Biofilms Microbiomes. (1):37.
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Higgins S, Gualdi S, Pinto-Carbó M, Eberl L. Copper resistance genes of Burkholderia cenocepacia H111 identified by transposon sequencing. Environ Microbiol Rep. 2020 Apr;1 (2):241-249. doi: 10.1111/1758-2229.12828. Epub 2020 Feb
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Liu, Y., Bellich, B., Hug, S., Eberl, L., Cescutti, P., and G. Pessi. 2020. The Exopolysaccharide Cepacian Plays a Role in the Establishment of the Paraburkholderia phymatum - Phaseolus vulgaris Symbiosis. Front Microbiol. 11:1600
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Secchi, E., Vitale, A., Mino, G. L., Kantsler, V., Eberl, L., Rusconi, R., and R. Stocker. 2020. The effect of flow on swimming bacteria controls the initial colonization of curved surfaces. Nat Commun. 1 (1):2851.
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Sieber, S., Daeppen, C., Jenul, C., Mannancherril, V., Eberl, L., and K. Gademann. 2020. Biosynthesis and Structure-Activity Relationship Investigations of the Diazeniumdiolate Antifungal Agent Fragin. Chembiochem. 2 (11):1587-92.
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Straub, H., Eberl, L., Zinn, M., Rossi, R. M., Maniura-Weber, K., and Q. Ren. 2020. A microfluidic platform for in situ investigation of biofilm formation and its treatment under controlled conditions. J Nanobiotechnology. 1 (1):166.
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Vandamme, P., and L. Eberl. Burkholderia. In: W.B. Whitman FR, P. Kämpfer, M. Trujillo, J. Chun, P. DeVos, B. Hedlund and S. Dedysh, editor. Bergey's Manual of Systematics of Archaea and Bacteria 2020. p. 1-45
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Vandenbussche, I., Sass, A., Pinto-Carbo, M., Mannweiler, O., Eberl, L., and T. Coenye. 2020. DNA Methylation Epigenetically Regulates Gene Expression in Burkholderia cenocepacia and Controls Biofilm Formation, Cell Aggregation, and Motility. mSphere. (4).
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Vitale, A., Paszti, S., Takahashi, K., Toyofuku, M., Pessi, G., and L. Eberl. 2020. Mapping of the Denitrification Pathway in Burkholderia thailandensis by Genome-Wide Mutant Profiling. J Bacteriol. 20 (23).
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Vitale, A., Pessi, G., Urfer, M., Locher, H. H., Zerbe, K., Obrecht, D., Robinson, J. A., and L. Eberl. 2020. Identification of Genes Required for Resistance to Peptidomimetic Antibiotics by Transposon Sequencing. Front Microbiol. 11:1681
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Hsiao, C.. C., Sieber, S., Georgiou, A., Bailly, A., Emmanouilidou, D., Carlier, A., Eberl, L., and K. Gademann. 2019. Synthesis and biological evaluation of the novel growth inhibitor streptol glucoside, isolated from an obligate plant symbiont. Chemistry. 2019 Feb 1;2 (7):1722-1726. doi: 10.1002/chem.201805693.

Richter, A.M., Fazli, M., Schmid, N., Shilling, R., Suppiger, A., Givskov, M., Eberl, L., and T. Tolker-Nielsen. 2019. Key players and individualists of cyclic-di-GMP signaling in Burkholderia cenocepacia . Front Microbiol. 2019 Jan 10;9:3286. doi:10.3389/fmicb.2018.03286.

Spiewak, H.L., Shastri, S., Zhang, L., Schwager, S., Eberl, L., Vergunst, A.C., and M.S. Thomas. 2019. Burkholderia cenocepacia utilizes a type VI secretion system for bacterial competition. Microbiologyopen. 2019 Jan 9:e774. doi: 10.1002/mbo3.774.

Straub, H., Bigger, C.M., Valentin, J., Abt, D., Qin, X.H., Eberl, L., Maniura-Weber, K., and Q. Ren. 2019. Bacterial adhesion on soft materials: passive physicochemical interactions or active bacterial mechanosensing? Adv. Healthc. Mater. 2019 Feb 18:e1801323. doi:10.1002/adhm.201801323

Calderon, C. E., Tienda, S., Heredia-Ponce, Z., Arrebola, E., Carcamo-Oyarce, G., Eberl, L., and F. M. Cazorla. 2019. The Compound 2-Hexyl, 5-Propyl Resorcinol Has a Key Role in Biofilm Formation by the Biocontrol Rhizobacterium Pseudomonas chlororaphis PCL1606. Front Microbiol. 10:396
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Fernandez, N., Cabrera, J. J., Varadarajan, A. R., Lutz, S., Ledermann, R., Roschitzki, B., Eberl, L., Bedmar, E. J., Fischer, H. M., Pessi, G., Ahrens, C. H., and S. Mesa. 2019. An Integrated Systems Approach Unveils New Aspects of Microoxia-Mediated Regulation in Bradyrhizobium diazoefficiens. Front Microbiol. 10:924
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Luther, A., Urfer, M., Zahn, M., Muller, M., Wang, S. Y., Mondal, M., Vitale, A., Hartmann, J. B., Sharpe, T., Monte, F. L., Kocherla, H., Cline, E., Pessi, G., Rath, P., Modaresi, S. M., Chiquet, P., Stiegeler, S., Verbree, C., Remus, T., Schmitt, M., Kolopp, C., Westwood, M. A., Desjonqueres, N., Brabet, E., Hell, S., LePoupon, K., Vermeulen, A., Jaisson, R., Rithie, V., Upert, G., Lederer, A., Zbinden, P., Wach, A., Moehle, K., Zerbe, K., Locher, H. H., Bernardini, F., Dale, G. E., Eberl, L., Wollscheid, B., Hiller, S., Robinson, J. A., and D. Obrecht. 2019. Chimeric peptidomimetic antibiotics against Gram-negative bacteria. Nature. 57 (7787):452-8.
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Sathe, S., Mathew, A., Agnoli, K., Eberl, L., and R. Kummerli. 2019. Genetic architecture constrains exploitation of siderophore cooperation in the bacterium Burkholderia cenocepacia. Evol Lett. (6):610-22. doi: 10.1002/evl3.144. PubMed PMID: 31844554; PubMed Central PMCID: PMCPMC6906993.
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Andreoni, F., Toyofuku M., Menzi, C., Kalawong, R., Mairpady Shambat, S., François, P., Zinkernagel, A.S., and L. Eberl. 2018. Antibiotics stimulate vesicles formation in Staphylococcus aureus in a phage-dependent and independent fashion and via different routes. Antimicrob. Agents Chemother. 2018 Dec 3. pii: AAC.01439-18. doi: 10.1128/AAC.01439-18.

Carrión, V.J., Cordovez, V., Tyc, O., Etalo, D.W., de Bruijn, I., de Jager, V.C.L., Medema, M.H., Eberl, L., and J.M. Raaijmakers JM. 2018. Involvement of Burkholderiaceae and sulfurous volatiles in disease-suppressive soils. ISME J. doi: 10.1038/s41396-018-0186-x

Crüsemann, M., Reher, R., Schamari, I., Brachmann, A.O., Ohbayashi, T., Kuschak, M., Malfacini, D., Seidinger, A., Pinto-Carbó, M., Richarz, R., Reuter, T., Kehraus, S., Hallab, A., Attwood, M., Schiöth, H.B., Mergaert, P., Kikuchi, Y., Schäberle, T.F., Kostenis, E., Wenzel, D., Müller, C.E., Piel, J., Carlier, A., Eberl, L., and G.M. König. 2018. Heterologous expression, biosynthetic studies, and ecological function of the selective gq-signaling inhibitor FR900359. Angew. Chem. Int. Ed. Engl. 57:836-840

Gomes, M.C., Tasrini, Y., Subramoni, S., Agnoli, K., Feliciano, J.R., Eberl, L., Sokol, P., O'Callaghan, D., and A.C. Vergunst. 2018. The afc antifungal activity cluster, which is under tight regulatory control of ShvR, is essential for transition from intracellular persistence of Burkholderia cenocepacia to acute pro-inflammatory infection. PLoSPathog. 2018 Dec 4;1 (12):e1007473. doi: 10.1371/journal.ppat.1007473.
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Jenul, C., Sieber, S., Daeppen, C., Mathew, A., Lardi, M., Pessi, G., Hoepfner, D., Neuburger, M., Linden, A., Gademann, K., and L. Eberl. 2018. Biosynthesis of fragin is controlled by a novel quorum sensing signal. Nat. Commun. 30; (1):1297. doi: 10.1038/s41467-018-03690-2.10.

Liu, Y., Pessi, G., Riedel, K., and L. Eberl. 2018. Identification of AHL- and BDSF-controlled proteins in Burkholderia cenocepacia by proteomics. Methods. Mol. Biol. 1673:193-202

Pinto-Carbó, M., Gademann, K., Eberl, L., and A. Carlier. 2018. Leaf nodule symbiosis: function and transmission of obligate bacterial endophytes. Curr. Opin. Plant. Biol. 44:23-31. doi: 10.1016/j.pbi.2018.01.001

Toyofuku M., Nomura N., and L. Eberl. 2018. Types and origins of bacterial membrane vesicles. Nat. Rev. Microbiol. 2018 Nov 5. doi: 10.1038/s41579-018-0112-2

Vetterli, S.U., Zerbe, K., Müller, M., Urfer, M., Mondal, M., Wang, S.Y., Moehle, K., Zerbe, O., Vitale, A., Pessi, G., Eberl, L., Wollscheid, B., and J.A. Robinson. 2018. Thanatin targets the intermembrane protein complex required for lipopolysaccharide transport in Escherichia coli . Sci. Adv. 2018 Nov 14; (11):eaau2634. doi: 10.1126/sciadv.aau2634.

Agnoli, K., Freitag, R., Gomes, M.C., Jenul, C., Suppiger, A., Mannweiler, O., Frauenknecht, C., Janser, D., Vergunst, A.C., and L. Eberl. 2017. Use of synthetic hybrid strains to determine the role of replicon 3 in virulence of the Burkholderia cepacia complex. Appl. Environ. Microbiol. 16;8 (13). doi: 10.1128/AEM.00461-17.

Toyofuku, M., Cárcamo-Oyarce, G., Yamamoto, T., Eisenstein, F., Hsiao, C., Kurosawa, M., Gademann, K., Pilhofer, M., Nomura, N., and L. Eberl. 2017. Prophage-triggered membrane vesicle formation through peptidoglycan damage in Bacillus subtilis . Nat. Commun. 7; (1):481. doi: 10.1038/s41467-017-00492-w.

de Campos, S.B., Lardi, M., Gandolfi, A., Eberl, L., and G. Pessi. 2017. Mutations in two Paraburkholderia phymatum Type VI secretion systems cause reduced fitness in interbacterial competition. Front. Microbiol. 12;8:2473. doi: 10.3389/fmicb.2017.02473

Carlier A., Cnockaert, M., Fehr, L., Vandamme, P. and L. Eberl L. 2017. Draft genome and description of Orrella dioscoreae gen. nov. sp. nov., a new species of Alcaligenaceae isolated from leaf acumens of Dioscorea sansibarensis. Syst. Appl. Microbiol. 40:11-21. doi: 10.1016/j.syapm.2016.10.002
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Chase, H.R., Eberl, L., Stephan, R., Jeong. H., Lee, C., Finkelstein, S., Negrete, F., Gangiredla, J., Patel, I., Tall, B.D., Gopinath, G.R., and A. Lehner. 2017. Draft genome sequence of draft genome sequence of Cronobacter sakazakii GP1999, sequence type 145, an epiphytic isolate obtained from the tomato's rhizoplane/rhizosphere continuum. Genome Announc. 2017 Aug 3; (31). doi: 10.1128/genomeA.00723-17.
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Fazli, M., Rybtke, M., Steiner, E., Weidel, E., Berthelsen, J., Groizeleau, J., Bin, W., Zhi, B.Z., Yaming, Z., Kaever, V., Givskov, M., Hartmann, R.W., Eberl, L., and T. Tolker-Nielsen. 2017. Regulation of Burkholderia cenocepacia biofilm formation by RpoN and the c-di-GMP effector BerB. Microbiologyopen 2017 Apr 16. doi: 10.1002/mbo3.480.
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Liu, Y., Lardi, M., Pedrioli, A., Eberl, L., and G. Pessi. 2017. NtrC-dependent control of exopolysaccharide synthesis and motility in Burkholderia cenocepacia H111. PLoS One 12:e0180362. doi: 10.1371/journal.pone.0180362
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Meier, M., Suppiger A., Eberl L., and S. Seeger. 2017. Functional silver-silicone-nanofilament-composite material for water disinfection. Small 1 (4). doi: 10.1002/smll.201601072.
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Schmid, N., Suppiger, A., Steiner, E., Pessi, G., Kaever, V., Fazli, M., Tolker-Nielsen. T., Jenal, U., and L. Eberl. 2017. High intracellular c-di-GMP levels antagonize quorum sensing and virulence gene expression in Burkholderia cenocepacia H111. Microbiology 16 (5):754-764. doi: 10.1099/mic.0.000452.
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Higgins, S., Sanchez-Contreras, M., Gualdi, S., Pinto-Carbo, M., Carlier, A., and Eberl, L. (2017). The essential genome of H111. J Bacteriol. doi: 10.1128/jb.00260-17
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Eberl, L. and P. Vandamme. 2016. Members of the genus Burkholderia: good and bad guys. F1000Res. 2016 May 26;5. pii: F1000 Faculty Rev-1007. doi: 10.12688/f1000research.8221.1.

Pinto-Carbó, M., Sieber, S., Dessein, S., Wicker, T., Verstraete, B., Gademann,K., Eberl, L., and A.L. Carlier. 2016. Evidence of horizontal gene transfer between obligate leaf nodule symbionts. ISME J. 10:2092-105. doi: 10.1038/ismej.2016.27.

Turnbull, L., Toyofuku*, M., Hynen, A.L., Kurosawa, M., Pessi, G., Petty, N.K., Osvath, S.R., Cárcamo-Oyarce, G., Gloag, E.S., Shimoni, R., Omasits, U., Ito, S., Yap, X., Monahan, L.G., Cavaliere, R., Ahrens, C.H., Charles, I.G., Nomura, N., Eberl*, L. and C.B. Whitchurch*. 2016. Explosive cell lysis is a novel mechanism for the biogenesis of bacterial membrane vesicles and biofilms. Nat Commun. 2016 Apr 14;7:11220. doi: 10.1038/ncomms11220
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Carlier, A., Fehr, L., Pinto, M., Schäberle, T., Dessein, S., König, G., and L. Eberl. The cyclic depsipeptide FR900359 from Ardisia crenata Sims is produced by the plant’s obligate leaf nodule symbiont Candidatus Burkholderia crenata. Environ. Microbiol. 2015 Dec 10. doi: 10.1111/1462-2920.13184. [Epub ahead of print
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Cárcamo-Oyarce, G., Lumjiaktase, P., Kümmerli, R., and L. Eberl. 2015. Quorum sensing triggers the stochastic escape of individual cells from Pseudomonas putida biofilms. Nat. Commun. 16:5945. doi: 10.1038/ncomms6945

Dubern, J.F., Cigana, C., De Simone, M., Lazenby, J., Juhas, M., Schwager, S., Bianconi, I., Döring, G., Eberl, L., Williams, P., Bragonzi, A., and M. Cámara. 2015. Integrated whole genome screening for Pseudomonas aeruginosa virulence genes using multiple disease models reveals that pathogenicity is host specific. Environ Microbiol. 17:4379-93. doi: 10.1111/1462-2920.12863
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Mathew, A., Jenul, C., Carlier, A.L., and L. Eberl. The role of siderophores in metal homeostasis of members of the genus Burkholderia. Environ. Microbiol. Rep. 2015 Dec 1. doi: 10.1111/1758-2229.12357. [Epub ahead of print

Sieber, S., Carlier, A., Neuburger, M., Grabenweger, G., Eberl, L., and K. Gademann. 2015. Isolation and total synthesis of kirkamide, an aminocyclitol from an obligate leaf nodule symbiont. Angew. Chem. Int. Ed. Engl. 54:7968-70. doi: 10.1002/anie.201502696

Stopnisek, N., Zühlke, D., Carlier, A., Barberán, A., Fierer, N., Becher, D., Riedel, K., Eberl, L., and L. Weisskopf. 2015. Molecular mechanisms underlying the close association between soil Burkholderia and fungi. ISME J. 2015 May 19. doi: 10.1038/ismej.2015.73
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Suppiger, A., Aguilar, C., and L. Eberl. Evidence for the widespread production of DSF family signal molecules by members of the genus Burkholderia by the aid of novel biosensors. Environ. Microbiol. Rep. 2015 Oct 21. doi: 10.1111/1758-2229.12348. [Epub ahead of print
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Urfer, M., Bogdanovic, J., Lo Monte, F., Moehle, K., Zerbe, K., Omasits, U., Ahrens, C.H., Pessi, G., Eberl, L., and J.A. Robinson. 2015. A Peptidomimetic Antibiotic Targets Outer Membrane Proteins and Disrupts Selectively the Outer Membrane in Escherichia coli. J. Biol. Chem. 2015 Dec 1. pii: jbc.M115.691725

Aguilar C, Schmid N, Lardi M, Pessi G, Eberl L. (2014). The IclR-family regulator BapR controls biofilm formation in B. cenocepacia H111.PLoS One. 21;9(3):e92920. doi:10.1371/journal.pone.0092920.

Bailly, A., Groenhagen, U., Schulz, S., Geisler, M., Eberl, L., and L. Weisskopf. 2014. The inter-kingdom volatile signal indole promotes root development by interfering with auxin signalling. Plant J. 80:758-71. doi: 10.1111/tpj.12666.

Carlier, A., Agnoli, K., Pessi, G., Suppiger, A., Jenul, C., Schmid, N., Tümmler, B., Pinto-Carbo, M., and L. Eberl. 2014. Genome Sequence of Burkholderia cenocepacia H111, a Cystic Fibrosis Airway Isolate. Genome Announc. 10; (2). pii: e00298-14. doi: 10.1128/genomeA.00298-14.

Fazli, M., Almblad, H., Rybtke, M.L., Givskov, M., Eberl, L., and T. Tolker-Nielsen. 2014. Regulation of biofilm formation in Pseudomonas and Burkholderia species. Environ. Microbiol. 16:1961-81. doi: 10.1111/1462-2920.12448

Carlier, A.L., Omasits, U., Ahrens, C.H., and L. Eberl. 2013. Proteomics analysis of Psychotria leaf nodule symbiosis: Improved genome annotation and metabolic predictions. Mol. Plant Microbe Interact. PMID: 2390226

Gomes, J., Grunau, A., Lawrence, A.K., Eberl, L., and K. Gademann. 2013. Bioinspired surfaces against bacterial infections. Chimia 67:1–4

Gomes, J., Huber, N., Grunau, A., Lawrence, A.K., Eberl, L., and K. Gademann. 2013. Fluorescent labeling agents for quorum sensing receptors (FLAQS) in live cells. Chemistry 19:9766-70.

Groenhagen, U., Baumgartner, R., Bailly, A., Gardiner, A., Eberl, L., Schulz, S., and L. Weisskopf. 2013. Production of bioactive volatiles by different Burkholderia ambifaria strains. J. Chem. Ecol. 39:892-906. doi: 10.1007/s10886-013-0315-y

Klockgether, J., Miethke, N., Kubesch, P., Bohn, Y.S., Brockhausen, I., Cramer, N., Eberl, L., Greipel, J., Herrmann, C., Herrmann, S., Horatzek, S., Lingner, M., Luciano, L., Salunkhe, P., Schomburg, D., Wehsling, M., Wiehlmann, L., Davenport, C.F., and B. Tümmler. 2012. Intraclonal diversity of the Pseudomonas aeruginosa cystic fibrosis airway isolates TBCF10839 and TBCF121838: distinct signatures of transcriptome, proteome, metabolome, adherence and pathogenicity despite an almost identical genome sequence. Environ. Microbiol. 15:191-210
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Pessi, G., Braunwalder, R., Grunau, A., Omasits, U., Ahrens, C.H., and L. Eberl. 2013. Response of Burkholderia cenocepacia H111 to micro-oxia.PLoS One 2;8:e72939. doi: 10.1371/journal.pone.0072939
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