Dr. Stefan Grob Department of Plant and Microbial Biology University of Zürich Zollikerstrasse 107 CH-8008 Zürich sgrob@botinst.uzh.ch phone: +41 (0)44 63 48250 fax: +41 (0)44 63 48204 List of Publications
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List of Publications

Grob S, Bonnet DM, Tirot L, Jullien PE. (2021) Methylome dynamics upon proteasome inhibition by the Pseudomonas virulence factor Syringolin A. bioRxiv 1;2021.01.19.427327.
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Grob, S. (2019) Three-dimensional chromosome organization in flowering plants. Briefings in Functional Genomics 19:83-91.
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Jullien PE, Grob S, Marchais A, Pumplin N, Chevalier C, Bonnet DMV, Otto C, Schott G, Voinnet O. (2020) Functional characterization of Arabidopsis ARGONAUTE 3 in reproductive tissues. Plant J, 103: 1796-1809.
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Picart-Picolo A, Grob S, Picault N, Franek M, Llauro C, Halter T, Maier TR, Jobet E, Descombin J, Zhang P, Vijayapalani P, Baum TJ, Navarro L, Dvorackova M, Mirouze M, Pontvianne F. (2020) Large tandem duplications affect gene expression, 3D organization, and plant-pathogen response. Genome Res 30:1583-92.
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Pontvianne F, Grob S. (2020) Three-dimensional nuclear organization in Arabidopsis thaliana. Journal of Plant Research 133:479–488.
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Teano G, Concia L, Carron L, Wolff L, Adamusová K, Fojtová M, Bourge M, Kramdi A, Colot V, Grossniklaus U, Bowler C, Baroux C, Carbone A, Probst AV, Procházková Schrumpfová P, Fajkus J, Amiard S, Grob S, Bourbousse C, Barneche F. (2020) Histone H1 protects telomeric repeats from H3K27me3 invasion in Arabidopsis. bioRxiv. 1;2020.11.28.402172.
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Grob S, Grossniklaus U. (2019) Invasive DNA elements modify the nuclear architecture of their insertion site by KNOT-linked silencing in Arabidopsis thaliana. Genome Biol 20:120.
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Kuon JE, Qi W, Schläpfer P, Hirsch-Hoffmann M, Rogalla von Bieberstein P, Patrignani A, Poveda L, Grob S, Keller M, Shimizu-Inatsugi R, Grossniklaus U, Vanderschuren H, Gruissem W. (2019) Haplotype-resolved genomes of geminivirus resistant and susceptible African cassava cultivars. BMC Biol 17.
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Grob S, Cavalli G. (2018) Technical Review: A hitchhiker's guide to chromosome conformation capture. Methods Mol Biol. 1675:233-246.

Grob, S. and Cavalli, G. (2018) Technical Review: A hitchhiker's guide to chromosome conformation capture. Methods Mol Biol. 1675, 233-246

Zhang L, Cai X, Wu J, Liu M, Grob S, Cheng F, Liang J, Cai C, Liu Z, Liu B, Wang F, Li S, Liu F, Li X, Cheng L, Yang W, Li M, Grossniklaus U, Zheng H, Wang X. (2018) Improved Brassica rapa reference genome by single-molecule sequencing and chromosome conformation capture technologies. Hortic Res 5, article # 50.
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Grob S, Grossniklaus U. (2017) Chromatin conformation capture-based analysis of nuclear architecture. Methods Mol Biol. 1456:15-32.

Grob S, Grossniklaus U. (2017) Chromosome conformation capture-based studies reveal novel features of plant nuclear architecture. Curr Opin Plant Biol. 36:149-157.
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Grob S. (2017) Circular chromosome conformation capture in plants. Methods Mol Biol. 1610:73-92.

Grob, S. (2017) Circular chromosome conformation capture in plants. Methods Mol Biol. 1610:73-92

Grob, S. (2017) Plants are not so different. Nat Plants 9:690-691.
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Grob, S. (2017) Plants are not so different. Nat Plants. 9, 690-691 (commentary article)

Schmid MW, Grob S, Grossniklaus U. (2015) HiCdat: a fast and easy-to-use Hi-C data analysis tool. BMC Bioinformatics 16:277.
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Grob S, Schmid MW, Grossniklaus U. (2014) Hi-C Analysis in Arabidopsis identifies the KNOT, a structure with similarities to the flamenco locus of Drosophila. Mol Cell 55:678–693.
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Grob, S, Schmid, MW, Grossniklaus, U. (2014). HiC Analysis in Arabidopsis Identifies the KNOT, a Structure with Similarities to the flamenco Locus of Drosophila. Molecular Cell, 55(5): 678-693.
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Grob S, Schmid MW, Luedtke NW, Wicker T, Grossniklaus U. (2013) Characterization of chromosomal architecture in Arabidopsis by chromosome conformation capture. Genome Biol 14:R129.
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Grob, S, Schmid, MW, Luedtke, NW, Wicker, T, and Grossniklaus, U. (2013) Characterization of chromosomal architecture in Arabidopsis by chromosome conformation capture. Genome Biol. 14:R129.
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Autran D*, Baroux C*, Raissig MT, Lenormand T, Wittig M, Grob S, Steimer A, Barann M, Klostermeier UC, LeblancO , Vielle-Calzada J-P, Rosenstiel P, Grimanelli D, Grossniklaus U. (2011) Maternal epigenetic pathways control parental contributions to Arabidopsis early embryogenesis, Cell, 145(5):707-19. *Equal Contribution
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Autran D, Baroux C, Raissig MT, Lenormand T, Wittig M, Grob S, Steimer A, Barann M, Klostermeier UC, Leblanc O, Vielle-Calzada J, Rosenstiel P, Grimanelli D, Grossniklaus U. (2011) Maternal Epigenetic Pathways Control Parental Contributions to Arabidopsis Early Embryogenesis. Cell 145:707–719.
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Baerenfaller K, Grossmann J, Grobei MA, Hull R, Hirsch-Hoffmann M, Yalovsky S, Zimmermann P, Grossniklaus U, Gruissem W, Baginsky S. (2008) Genome-scale proteomics reveals Arabidopsis thaliana gene models and proteome dynamics. Science 320(5878):938-41
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